Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Matn2-206ENSMUST00000228570 2798 ntBASIC12.81□□□□□ -0.36
Clrn1Q8K445 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn1Q8K445 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm42612-201ENSMUST00000197986 623 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm43170-201ENSMUST00000199827 612 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm6218-201ENSMUST00000219812 628 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Syt7-205ENSMUST00000224135 1557 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.8□□□□□ -0.36
Clrn1Q8K445 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn1Q8K445 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.79□□□□□ -0.36
Clrn1Q8K445 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.79□□□□□ -0.36
Clrn1Q8K445 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.79□□□□□ -0.36
Clrn1Q8K445 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm5279-201ENSMUST00000199575 745 ntBASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.79□□□□□ -0.36
Clrn1Q8K445 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms