Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Gm12363-201ENSMUST00000122250 668 ntBASIC15.26■□□□□ 0.03
Syne4Q8CII8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.26■□□□□ 0.03
Syne4Q8CII8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Gm4768-201ENSMUST00000206199 686 ntBASIC15.26■□□□□ 0.03
Syne4Q8CII8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.26■□□□□ 0.03
Syne4Q8CII8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Syne4Q8CII8 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.26■□□□□ 0.03
Syne4Q8CII8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.25■□□□□ 0.03
Syne4Q8CII8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.25■□□□□ 0.03
Syne4Q8CII8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.25■□□□□ 0.03
Syne4Q8CII8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.25■□□□□ 0.03
Syne4Q8CII8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm16505-201ENSMUST00000179981 232 ntBASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.25■□□□□ 0.03
Syne4Q8CII8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Syne4Q8CII8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Gm11222-201ENSMUST00000119005 738 ntBASIC15.24■□□□□ 0.03
Syne4Q8CII8 Gm11964-201ENSMUST00000120982 444 ntBASIC15.24■□□□□ 0.03
Syne4Q8CII8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Gm18584-201ENSMUST00000203098 964 ntBASIC15.24■□□□□ 0.03
Syne4Q8CII8 Rps4l-202ENSMUST00000204242 789 ntBASIC15.24■□□□□ 0.03
Syne4Q8CII8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Syne4Q8CII8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.24■□□□□ 0.03
Syne4Q8CII8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Syne4Q8CII8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms