Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Gm2810-201ENSMUST00000118681 990 ntBASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc28bQ8CEG5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc28bQ8CEG5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Gm6443-201ENSMUST00000203599 874 ntBASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Psmb5-202ENSMUST00000227257 622 ntBASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ccdc28bQ8CEG5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms