Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm27618-201ENSMUST00000183671 60 ntBASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Gm15393-201ENSMUST00000120499 219 ntBASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vcpip1Q8CDG3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vcpip1Q8CDG3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm12585-201ENSMUST00000117307 290 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm14767-201ENSMUST00000121559 586 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm3436-201ENSMUST00000179930 840 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Vcpip1Q8CDG3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms