Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lysmd4Q8CC84 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Gm12428-201ENSMUST00000119844 727 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Rprl2-201ENSMUST00000157150 290 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Gm18049-201ENSMUST00000208909 581 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lysmd4Q8CC84 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm5566-201ENSMUST00000116118 459 ntBASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm6916-202ENSMUST00000205523 195 ntBASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lysmd4Q8CC84 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms