Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a6Q8C6K9 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a6Q8C6K9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Gm15370-201ENSMUST00000117158 253 ntBASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Col6a6Q8C6K9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm27320-201ENSMUST00000184892 109 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Mir433-201ENSMUST00000093564 124 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm4986-201ENSMUST00000119731 549 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.2□□□□□ -0.46
Col6a6Q8C6K9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms