Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Gm26315-201ENSMUST00000083890 321 ntBASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Usp44Q8C2S0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Gm15429-201ENSMUST00000151268 798 ntBASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Gm44397-201ENSMUST00000195950 113 ntBASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Gm45841-201ENSMUST00000207700 164 ntBASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Usp44Q8C2S0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Usp44Q8C2S0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Usp44Q8C2S0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Usp44Q8C2S0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Gm27701-201ENSMUST00000184498 110 ntBASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp44Q8C2S0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp44Q8C2S0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms