Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ska3Q8C263 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.78□□□□□ -0.36
Ska3Q8C263 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ska3Q8C263 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.78□□□□□ -0.36
Ska3Q8C263 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.78□□□□□ -0.36
Ska3Q8C263 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ska3Q8C263 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ska3Q8C263 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.77□□□□□ -0.36
Ska3Q8C263 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ska3Q8C263 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Ska3Q8C263 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Gm12859-201ENSMUST00000117834 427 ntBASIC12.77□□□□□ -0.37
Ska3Q8C263 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.77□□□□□ -0.37
Ska3Q8C263 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.77□□□□□ -0.37
Ska3Q8C263 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ska3Q8C263 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ska3Q8C263 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.77□□□□□ -0.37
Ska3Q8C263 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.76□□□□□ -0.37
Ska3Q8C263 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gm15770-201ENSMUST00000117498 584 ntBASIC12.76□□□□□ -0.37
Ska3Q8C263 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.76□□□□□ -0.37
Ska3Q8C263 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.76□□□□□ -0.37
Ska3Q8C263 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.76□□□□□ -0.37
Ska3Q8C263 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ska3Q8C263 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ska3Q8C263 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.76□□□□□ -0.37
Ska3Q8C263 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ska3Q8C263 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska3Q8C263 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska3Q8C263 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.75□□□□□ -0.37
Ska3Q8C263 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska3Q8C263 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska3Q8C263 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ska3Q8C263 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms