Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps9d1Q8C190 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm22175-201ENSMUST00000175007 78 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm27631-201ENSMUST00000184163 466 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm27430-201ENSMUST00000184585 107 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm44333-201ENSMUST00000197168 107 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Gm45453-201ENSMUST00000211758 853 ntBASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps9d1Q8C190 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Gm37714-201ENSMUST00000194742 342 ntBASIC12.71□□□□□ -0.37
Vps9d1Q8C190 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps9d1Q8C190 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps9d1Q8C190 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps9d1Q8C190 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms