Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Ube3dQ8BX13 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Ube3dQ8BX13 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ube3dQ8BX13 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ube3dQ8BX13 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ube3dQ8BX13 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Gm19891-201ENSMUST00000189771 303 ntBASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube3dQ8BX13 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Gm22189-201ENSMUST00000103822 86 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Gm42612-201ENSMUST00000197986 623 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Gm43170-201ENSMUST00000199827 612 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Gm44608-201ENSMUST00000206827 855 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.07□□□□□ -0.48
Ube3dQ8BX13 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ube3dQ8BX13 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube3dQ8BX13 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms