Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdk5rap1Q8BTW8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm12390-201ENSMUST00000117897 397 ntBASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap1Q8BTW8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm12403-201ENSMUST00000121384 959 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm8652-201ENSMUST00000181363 964 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm27847-201ENSMUST00000183711 107 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm27375-201ENSMUST00000183799 107 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Gm29608-201ENSMUST00000190444 463 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap1Q8BTW8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms