Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pum3Q8BKS9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pum3Q8BKS9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm15371-201ENSMUST00000117057 784 ntBASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm38144-201ENSMUST00000192790 465 ntBASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm38223-201ENSMUST00000194484 695 ntBASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm42550-201ENSMUST00000201553 960 ntBASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pum3Q8BKS9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Pum3Q8BKS9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Gm13689-201ENSMUST00000119360 685 ntBASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pum3Q8BKS9 Gm12403-201ENSMUST00000121384 959 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms