Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn3Q8BHH8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn3Q8BHH8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clrn3Q8BHH8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Clrn3Q8BHH8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn3Q8BHH8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.8□□□□□ -0.36
Clrn3Q8BHH8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn3Q8BHH8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Gm6912-201ENSMUST00000117218 544 ntBASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Gm24420-201ENSMUST00000176676 59 ntBASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn3Q8BHH8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn3Q8BHH8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Gm4875-201ENSMUST00000118257 786 ntBASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clrn3Q8BHH8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms