Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Mir7684-201ENSMUST00000183858 60 ntBASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srrm3Q80WV7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Gm7730-201ENSMUST00000212486 454 ntBASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Gm9899-201ENSMUST00000065519 555 ntBASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.17□□□□□ -0.14
Srrm3Q80WV7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Mir1938-201ENSMUST00000158746 100 ntBASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Mir6420-201ENSMUST00000185032 102 ntBASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srrm3Q80WV7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srrm3Q80WV7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms