Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Usp8Q80U87 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Usp8Q80U87 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.64□□□□□ -0.23
Usp8Q80U87 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Gm15653-201ENSMUST00000119247 907 ntBASIC13.63□□□□□ -0.23
Usp8Q80U87 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.63□□□□□ -0.23
Usp8Q80U87 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Gm6916-202ENSMUST00000205523 195 ntBASIC13.63□□□□□ -0.23
Usp8Q80U87 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.63□□□□□ -0.23
Usp8Q80U87 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Usp8Q80U87 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.62□□□□□ -0.23
Usp8Q80U87 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp8Q80U87 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.62□□□□□ -0.23
Usp8Q80U87 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Usp8Q80U87 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Usp8Q80U87 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp8Q80U87 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.62□□□□□ -0.23
Usp8Q80U87 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp8Q80U87 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp8Q80U87 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp8Q80U87 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Usp8Q80U87 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp8Q80U87 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp8Q80U87 Gm23935-201ENSMUST00000102303 57 ntBASIC13.61□□□□□ -0.23
Usp8Q80U87 Gm24270-201ENSMUST00000102326 57 ntBASIC13.61□□□□□ -0.23
Usp8Q80U87 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms