Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm12384-201ENSMUST00000119228 919 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm20614-201ENSMUST00000177106 632 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm24196-201ENSMUST00000179161 110 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pif1Q80SX8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Olfr582-201ENSMUST00000098212 960 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.53□□□□□ -0.4
Pif1Q80SX8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms