Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.39□□□□□ -0.27
Pcdh8Q7TSK3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm13689-201ENSMUST00000119360 685 ntBASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdh8Q7TSK3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh8Q7TSK3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh8Q7TSK3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms