Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.05□□□□□ -0.64
Vma21Q78T54 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm22065-201ENSMUST00000103753 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm22066-201ENSMUST00000103761 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24932-201ENSMUST00000103763 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24115-201ENSMUST00000103799 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm22190-201ENSMUST00000103827 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm22191-201ENSMUST00000103831 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24721-201ENSMUST00000103849 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm28018-201ENSMUST00000103869 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm26399-201ENSMUST00000103937 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm25349-201ENSMUST00000177728 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm23616-201ENSMUST00000177797 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm25871-201ENSMUST00000177816 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24752-201ENSMUST00000178240 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24496-201ENSMUST00000178287 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm25649-201ENSMUST00000178476 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm25548-201ENSMUST00000178681 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm23147-201ENSMUST00000178841 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm26095-201ENSMUST00000179270 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm22171-201ENSMUST00000179283 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm23936-201ENSMUST00000179354 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm22619-201ENSMUST00000179516 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm25255-201ENSMUST00000179579 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24755-201ENSMUST00000179691 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm26506-201ENSMUST00000179692 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm25086-201ENSMUST00000179931 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm23243-201ENSMUST00000180047 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24659-201ENSMUST00000180212 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm24169-201ENSMUST00000180244 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm23689-201ENSMUST00000180354 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm27359-201ENSMUST00000184153 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm27785-201ENSMUST00000184268 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm27466-201ENSMUST00000184396 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm27703-201ENSMUST00000184836 110 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm29541-201ENSMUST00000191351 678 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm10253-201ENSMUST00000194270 940 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm44335-201ENSMUST00000196879 141 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm44297-201ENSMUST00000198304 141 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm44346-201ENSMUST00000198851 141 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mir497b-201ENSMUST00000093601 125 ntBASIC11.04□□□□□ -0.64
Vma21Q78T54 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.04□□□□□ -0.64
Vma21Q78T54 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms