Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15236-201ENSMUST00000117309 379 ntBASIC15.71■□□□□ 0.11
Nup98Q6PFD9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nup98Q6PFD9 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.71■□□□□ 0.1
Nup98Q6PFD9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Gm13316-201ENSMUST00000140537 691 ntBASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Gm10608-202ENSMUST00000213924 676 ntBASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Gm30285-201ENSMUST00000214614 422 ntBASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nup98Q6PFD9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Gm10434-201ENSMUST00000101158 471 ntBASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nup98Q6PFD9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.69■□□□□ 0.1
Nup98Q6PFD9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm11222-201ENSMUST00000119005 738 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms