Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CtifQ6PEE2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm27525-201ENSMUST00000184465 107 ntBASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm7063-201ENSMUST00000186840 981 ntBASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm6089-201ENSMUST00000197666 938 ntBASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.43□□□□□ -0.1
CtifQ6PEE2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.43□□□□□ -0.1
CtifQ6PEE2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CtifQ6PEE2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CtifQ6PEE2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm4899-201ENSMUST00000178708 719 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm2213-201ENSMUST00000197485 688 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.42□□□□□ -0.1
CtifQ6PEE2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CtifQ6PEE2 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.41□□□□□ -0.1
CtifQ6PEE2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CtifQ6PEE2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms