Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm3786-201ENSMUST00000202659 378 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm44069-201ENSMUST00000204898 506 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snrnp40Q6PE01 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Gm16202-201ENSMUST00000117532 544 ntBASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.88□□□□□ -0.51
Snrnp40Q6PE01 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm12997-201ENSMUST00000120207 640 ntBASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm21769-201ENSMUST00000211922 111 ntBASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Snrnp40Q6PE01 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms