Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm8856-201ENSMUST00000185254 1144 ntBASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Gm44100-201ENSMUST00000204329 436 ntBASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Tmed9-203ENSMUST00000224741 1450 ntBASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slx4Q6P1D7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Slx4Q6P1D7 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm20426-201ENSMUST00000173657 440 ntBASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm37835-201ENSMUST00000193305 361 ntBASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm10109-202ENSMUST00000206890 1211 ntBASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm45770-201ENSMUST00000212105 616 ntBASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slx4Q6P1D7 Gm12502-201ENSMUST00000120197 444 ntBASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Gm14704-201ENSMUST00000120300 874 ntBASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slx4Q6P1D7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Slx4Q6P1D7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Gm37737-201ENSMUST00000195013 1638 ntBASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Gm18916-201ENSMUST00000198264 1246 ntBASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Gm6458-201ENSMUST00000211573 635 ntBASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Gm8712-201ENSMUST00000221090 701 ntBASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slx4Q6P1D7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms