Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Clcn1Q64347 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Clcn1Q64347 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.16■□□□□ 0.34
Clcn1Q64347 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.15■□□□□ 0.34
Clcn1Q64347 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.15■□□□□ 0.34
Clcn1Q64347 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm27243-201ENSMUST00000183964 521 ntBASIC17.15■□□□□ 0.34
Clcn1Q64347 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm26315-201ENSMUST00000083890 321 ntBASIC17.15■□□□□ 0.34
Clcn1Q64347 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.15■□□□□ 0.34
Clcn1Q64347 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.15■□□□□ 0.34
Clcn1Q64347 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn1Q64347 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clcn1Q64347 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clcn1Q64347 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.14■□□□□ 0.34
Clcn1Q64347 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.14■□□□□ 0.33
Clcn1Q64347 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Gm43118-201ENSMUST00000199149 775 ntBASIC17.14■□□□□ 0.33
Clcn1Q64347 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.14■□□□□ 0.33
Clcn1Q64347 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.14■□□□□ 0.33
Clcn1Q64347 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcn1Q64347 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn1Q64347 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.13■□□□□ 0.33
Clcn1Q64347 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.13■□□□□ 0.33
Clcn1Q64347 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms