Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim27Q62158 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.65■□□□□ 0.26
Trim27Q62158 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.64■□□□□ 0.26
Trim27Q62158 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Gm7488-201ENSMUST00000117148 684 ntBASIC16.64■□□□□ 0.25
Trim27Q62158 Gm13689-201ENSMUST00000119360 685 ntBASIC16.64■□□□□ 0.25
Trim27Q62158 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.64■□□□□ 0.25
Trim27Q62158 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim27Q62158 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim27Q62158 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim27Q62158 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Trim27Q62158 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trim27Q62158 Mir6977-201ENSMUST00000184960 64 ntBASIC16.64■□□□□ 0.25
Trim27Q62158 Gm28631-201ENSMUST00000190740 334 ntBASIC16.64■□□□□ 0.25
Trim27Q62158 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.64■□□□□ 0.25
Trim27Q62158 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.64■□□□□ 0.25
Trim27Q62158 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim27Q62158 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Trim27Q62158 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trim27Q62158 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Trim27Q62158 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim27Q62158 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim27Q62158 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim27Q62158 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim27Q62158 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Gm12341-201ENSMUST00000119724 503 ntBASIC16.63■□□□□ 0.25
Trim27Q62158 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim27Q62158 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.63■□□□□ 0.25
Trim27Q62158 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim27Q62158 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim27Q62158 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim27Q62158 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.63■□□□□ 0.25
Trim27Q62158 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim27Q62158 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trim27Q62158 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim27Q62158 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trim27Q62158 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim27Q62158 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim27Q62158 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim27Q62158 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim27Q62158 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.62■□□□□ 0.25
Trim27Q62158 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim27Q62158 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim27Q62158 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim27Q62158 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms