Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.1□□□□□ -0.15
Smarcd1Q61466 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gm11814-201ENSMUST00000119515 929 ntBASIC14.09□□□□□ -0.15
Smarcd1Q61466 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gm17150-201ENSMUST00000165577 381 ntBASIC14.09□□□□□ -0.15
Smarcd1Q61466 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gm43433-201ENSMUST00000196573 481 ntBASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcd1Q61466 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.08□□□□□ -0.15
Smarcd1Q61466 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcd1Q61466 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcd1Q61466 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcd1Q61466 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.08□□□□□ -0.16
Smarcd1Q61466 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Gm4984-201ENSMUST00000115987 360 ntBASIC14.08□□□□□ -0.16
Smarcd1Q61466 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.08□□□□□ -0.16
Smarcd1Q61466 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.08□□□□□ -0.16
Smarcd1Q61466 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd1Q61466 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms