Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm12134-201ENSMUST00000122109 520 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm19459-201ENSMUST00000176240 835 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm45219-201ENSMUST00000205602 465 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm45118-201ENSMUST00000208928 825 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm7848-201ENSMUST00000210739 718 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.85□□□□□ -0.03
Col11a1Q61245 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm38092-201ENSMUST00000195600 653 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gzmn-202ENSMUST00000225535 989 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.85□□□□□ -0.03
Col11a1Q61245 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Col11a1Q61245 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Col11a1Q61245 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.84□□□□□ -0.03
Col11a1Q61245 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Col11a1Q61245 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm13296-201ENSMUST00000117854 997 ntBASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm17040-202ENSMUST00000170597 889 ntBASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm27438-201ENSMUST00000183480 110 ntBASIC14.84□□□□□ -0.03
Col11a1Q61245 Gm45433-201ENSMUST00000209386 247 ntBASIC14.84□□□□□ -0.03
Col11a1Q61245 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col11a1Q61245 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col11a1Q61245 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col11a1Q61245 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col11a1Q61245 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col11a1Q61245 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col11a1Q61245 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Col11a1Q61245 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col11a1Q61245 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col11a1Q61245 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Gm6963-201ENSMUST00000147879 379 ntBASIC14.83□□□□□ -0.04
Col11a1Q61245 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Gm7003-201ENSMUST00000195089 312 ntBASIC14.83□□□□□ -0.04
Col11a1Q61245 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.83□□□□□ -0.04
Col11a1Q61245 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.83□□□□□ -0.04
Col11a1Q61245 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Spcs1-203ENSMUST00000226374 592 ntBASIC14.83□□□□□ -0.04
Col11a1Q61245 Ntng1-201ENSMUST00000051253 327 ntBASIC14.83□□□□□ -0.04
Col11a1Q61245 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.83□□□□□ -0.04
Col11a1Q61245 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.83□□□□□ -0.04
Col11a1Q61245 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col11a1Q61245 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms