Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.19□□□□□ -0.14
Traf3Q60803 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Traf3Q60803 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Traf3Q60803 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Matn2-206ENSMUST00000228570 2798 ntBASIC14.19□□□□□ -0.14
Traf3Q60803 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.19□□□□□ -0.14
Traf3Q60803 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.19□□□□□ -0.14
Traf3Q60803 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.19□□□□□ -0.14
Traf3Q60803 Gm9908-201ENSMUST00000211534 448 ntBASIC14.19□□□□□ -0.14
Traf3Q60803 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.19□□□□□ -0.14
Traf3Q60803 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Traf3Q60803 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Traf3Q60803 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.19□□□□□ -0.14
Traf3Q60803 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Traf3Q60803 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Traf3Q60803 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.18□□□□□ -0.14
Traf3Q60803 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Traf3Q60803 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.18□□□□□ -0.14
Traf3Q60803 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.18□□□□□ -0.14
Traf3Q60803 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Traf3Q60803 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.18□□□□□ -0.14
Traf3Q60803 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Traf3Q60803 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Traf3Q60803 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Traf3Q60803 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.17□□□□□ -0.14
Traf3Q60803 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.17□□□□□ -0.14
Traf3Q60803 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Traf3Q60803 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Traf3Q60803 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm12138-201ENSMUST00000122180 951 ntBASIC14.17□□□□□ -0.14
Traf3Q60803 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm2495-201ENSMUST00000191160 466 ntBASIC14.17□□□□□ -0.14
Traf3Q60803 Gm38223-201ENSMUST00000194484 695 ntBASIC14.17□□□□□ -0.14
Traf3Q60803 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.17□□□□□ -0.14
Traf3Q60803 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm45384-201ENSMUST00000210451 277 ntBASIC14.17□□□□□ -0.14
Traf3Q60803 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Traf3Q60803 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Traf3Q60803 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.17□□□□□ -0.14
Traf3Q60803 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms