Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Foxd4Q60688 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.15□□□□□ -0.14
Foxd4Q60688 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Gm44845-201ENSMUST00000208773 335 ntBASIC14.15□□□□□ -0.14
Foxd4Q60688 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Foxd4Q60688 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Foxd4Q60688 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC14.14□□□□□ -0.15
Foxd4Q60688 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Foxd4Q60688 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.14□□□□□ -0.15
Foxd4Q60688 Mir7023-201ENSMUST00000185093 64 ntBASIC14.14□□□□□ -0.15
Foxd4Q60688 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.14□□□□□ -0.15
Foxd4Q60688 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.14□□□□□ -0.15
Foxd4Q60688 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.14□□□□□ -0.15
Foxd4Q60688 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxd4Q60688 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxd4Q60688 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Mir449b-201ENSMUST00000104833 80 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Gm10275-202ENSMUST00000168697 495 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Gm22175-201ENSMUST00000175007 78 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Gm38280-201ENSMUST00000192610 158 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Gm10275-201ENSMUST00000092620 635 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxd4Q60688 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.13□□□□□ -0.15
Foxd4Q60688 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxd4Q60688 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxd4Q60688 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxd4Q60688 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms