Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gm15770-201ENSMUST00000117498 584 ntBASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gm15678-201ENSMUST00000117573 960 ntBASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gm12490-201ENSMUST00000120255 560 ntBASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xrcc1Q60596 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.96□□□□□ -0.33
Xrcc1Q60596 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.96□□□□□ -0.33
Xrcc1Q60596 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xrcc1Q60596 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.96□□□□□ -0.34
Xrcc1Q60596 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Xrcc1Q60596 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Gm17330-201ENSMUST00000221047 165 ntBASIC12.95□□□□□ -0.34
Xrcc1Q60596 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Xrcc1Q60596 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms