Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim38Q5SZ99 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm27989-201ENSMUST00000184721 107 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm27838-201ENSMUST00000184829 128 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim38Q5SZ99 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.07□□□□□ -0.16
Trim38Q5SZ99 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Gm9522-201ENSMUST00000182394 926 ntBASIC14.07□□□□□ -0.16
Trim38Q5SZ99 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Gm20445-201ENSMUST00000061905 565 ntBASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim38Q5SZ99 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim38Q5SZ99 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms