Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mir698-201ENSMUST00000102164 109 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mir874-201ENSMUST00000104769 76 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm13884-201ENSMUST00000118103 829 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm6222-201ENSMUST00000120787 396 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm28659-201ENSMUST00000188013 759 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm15427-201ENSMUST00000117288 531 ntBASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm2810-201ENSMUST00000118681 990 ntBASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm12350-201ENSMUST00000121208 462 ntBASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms