Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Gm43630-201ENSMUST00000201550 776 ntBASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Gm9899-201ENSMUST00000065519 555 ntBASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38aQ4FK66 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm12742-201ENSMUST00000117326 410 ntBASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm27331-201ENSMUST00000183705 60 ntBASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38aQ4FK66 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Gm12957-201ENSMUST00000117835 377 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Gm12384-201ENSMUST00000119228 919 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Gm16177-201ENSMUST00000120728 718 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Snora78-201ENSMUST00000158630 128 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Gm43818-201ENSMUST00000200605 466 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Prpf38aQ4FK66 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms