Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Gm13015-201ENSMUST00000118674 204 ntBASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Gm10253-201ENSMUST00000194270 940 ntBASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fndc4Q3TR08 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fndc4Q3TR08 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Fndc4Q3TR08 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fndc4Q3TR08 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gm14701-201ENSMUST00000117156 348 ntBASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gm7774-201ENSMUST00000200064 533 ntBASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fndc4Q3TR08 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms