Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Gm2445-201ENSMUST00000182798 989 ntBASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Rps4l-201ENSMUST00000071745 943 ntBASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccbe1Q3MI99 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Gm15372-201ENSMUST00000120729 834 ntBASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Gm27646-201ENSMUST00000183989 110 ntBASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccbe1Q3MI99 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Gm7862-201ENSMUST00000121461 292 ntBASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Gm1401-201ENSMUST00000122048 772 ntBASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Gm37230-201ENSMUST00000194491 818 ntBASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Ccbe1Q3MI99 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms