Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm29076-201ENSMUST00000187689 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28302-201ENSMUST00000187931 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28646-201ENSMUST00000188220 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28205-201ENSMUST00000189177 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm29032-201ENSMUST00000189797 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28695-201ENSMUST00000190300 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm37448-201ENSMUST00000192795 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm42657-201ENSMUST00000201746 211 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm8712-201ENSMUST00000221090 701 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.01□□□□□ -0.49
Chd8Q09XV5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Gm13937-201ENSMUST00000121000 988 ntBASIC12.01□□□□□ -0.49
Chd8Q09XV5 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Mir7686-201ENSMUST00000200604 57 ntBASIC12.01□□□□□ -0.49
Chd8Q09XV5 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.01□□□□□ -0.49
Chd8Q09XV5 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.01□□□□□ -0.49
Chd8Q09XV5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Gm12502-201ENSMUST00000120197 444 ntBASIC12.01□□□□□ -0.49
Chd8Q09XV5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chd8Q09XV5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Gm6644-201ENSMUST00000186507 951 ntBASIC12□□□□□ -0.49
Chd8Q09XV5 Gm29608-201ENSMUST00000190444 463 ntBASIC12□□□□□ -0.49
Chd8Q09XV5 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Gm3619-201ENSMUST00000219947 775 ntBASIC12□□□□□ -0.49
Chd8Q09XV5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Chd8Q09XV5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chd8Q09XV5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12□□□□□ -0.49
Chd8Q09XV5 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12□□□□□ -0.49
Chd8Q09XV5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chd8Q09XV5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chd8Q09XV5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm9625-201ENSMUST00000180422 955 ntBASIC11.99□□□□□ -0.49
Chd8Q09XV5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.99□□□□□ -0.49
Chd8Q09XV5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms