Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.65□□□□□ -0.06
Col9a2Q07643 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Col9a2Q07643 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.65□□□□□ -0.06
Col9a2Q07643 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.65□□□□□ -0.06
Col9a2Q07643 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.65□□□□□ -0.06
Col9a2Q07643 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col9a2Q07643 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col9a2Q07643 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col9a2Q07643 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col9a2Q07643 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.64□□□□□ -0.07
Col9a2Q07643 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.64□□□□□ -0.07
Col9a2Q07643 Snora78-201ENSMUST00000158630 128 ntBASIC14.64□□□□□ -0.07
Col9a2Q07643 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Gm27514-201ENSMUST00000183692 110 ntBASIC14.64□□□□□ -0.07
Col9a2Q07643 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.64□□□□□ -0.07
Col9a2Q07643 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.64□□□□□ -0.07
Col9a2Q07643 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col9a2Q07643 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm1335-201ENSMUST00000121653 386 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm4271-201ENSMUST00000174444 973 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.63□□□□□ -0.07
Col9a2Q07643 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col9a2Q07643 Gm10146-201ENSMUST00000072739 309 ntBASIC14.63□□□□□ -0.07
Col9a2Q07643 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col9a2Q07643 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms