Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC20.33■□□□□ 0.85
Col17a1Q07563 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Col17a1Q07563 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col17a1Q07563 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.33■□□□□ 0.85
Col17a1Q07563 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC20.33■□□□□ 0.85
Col17a1Q07563 Gm1848-201ENSMUST00000120711 789 ntBASIC20.33■□□□□ 0.85
Col17a1Q07563 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Col17a1Q07563 Gm10731-201ENSMUST00000181171 448 ntBASIC20.33■□□□□ 0.85
Col17a1Q07563 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
Col17a1Q07563 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC20.33■□□□□ 0.85
Col17a1Q07563 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col17a1Q07563 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col17a1Q07563 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col17a1Q07563 Gm44291-201ENSMUST00000203102 2865 ntBASIC20.33■□□□□ 0.84
Col17a1Q07563 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col17a1Q07563 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Col17a1Q07563 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col17a1Q07563 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col17a1Q07563 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col17a1Q07563 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Col17a1Q07563 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Gm18159-201ENSMUST00000174516 1070 ntBASIC20.32■□□□□ 0.84
Col17a1Q07563 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 AC153962.2-201ENSMUST00000219417 550 ntBASIC20.32■□□□□ 0.84
Col17a1Q07563 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col17a1Q07563 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col17a1Q07563 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col17a1Q07563 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col17a1Q07563 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Gm6170-201ENSMUST00000187672 1388 ntBASIC20.32■□□□□ 0.84
Col17a1Q07563 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col17a1Q07563 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col17a1Q07563 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Gm12196-201ENSMUST00000120954 262 ntBASIC20.31■□□□□ 0.84
Col17a1Q07563 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Col17a1Q07563 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col17a1Q07563 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Col17a1Q07563 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col17a1Q07563 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col17a1Q07563 Gm18201-201ENSMUST00000174735 875 ntBASIC20.3■□□□□ 0.84
Col17a1Q07563 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col17a1Q07563 Gm18038-201ENSMUST00000197900 485 ntBASIC20.3■□□□□ 0.84
Col17a1Q07563 Gm40879-201ENSMUST00000220759 612 ntBASIC20.3■□□□□ 0.84
Col17a1Q07563 Gm7959-201ENSMUST00000221823 1078 ntBASIC20.3■□□□□ 0.84
Col17a1Q07563 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
Col17a1Q07563 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Col17a1Q07563 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col17a1Q07563 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col17a1Q07563 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col17a1Q07563 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col17a1Q07563 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col17a1Q07563 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col17a1Q07563 Gm8337-201ENSMUST00000187358 1938 ntBASIC20.29■□□□□ 0.84
Col17a1Q07563 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col17a1Q07563 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col17a1Q07563 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Col17a1Q07563 Gm14704-201ENSMUST00000120300 874 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms