Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.64□□□□□ -0.23
Pfdn6Q03958 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm27772-201ENSMUST00000184900 187 ntBASIC13.64□□□□□ -0.23
Pfdn6Q03958 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm9063-201ENSMUST00000223299 582 ntBASIC13.64□□□□□ -0.23
Pfdn6Q03958 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm5867-201ENSMUST00000063197 592 ntBASIC13.64□□□□□ -0.23
Pfdn6Q03958 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gm38294-201ENSMUST00000192831 381 ntBASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gm18905-201ENSMUST00000205454 928 ntBASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.63□□□□□ -0.23
Pfdn6Q03958 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.63□□□□□ -0.23
Pfdn6Q03958 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.63□□□□□ -0.23
Pfdn6Q03958 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.62□□□□□ -0.23
Pfdn6Q03958 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Gm13223-201ENSMUST00000118609 747 ntBASIC13.62□□□□□ -0.23
Pfdn6Q03958 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Gm7775-201ENSMUST00000218871 853 ntBASIC13.62□□□□□ -0.23
Pfdn6Q03958 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.62□□□□□ -0.23
Pfdn6Q03958 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms