Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcc1P97496 Gm3890-201ENSMUST00000182416 207 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcc1P97496 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 Gm5363-201ENSMUST00000211927 938 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Smarcc1P97496 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcc1P97496 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.9■□□□□ 0.3
Smarcc1P97496 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarcc1P97496 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.9■□□□□ 0.3
Smarcc1P97496 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc1P97496 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcc1P97496 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcc1P97496 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcc1P97496 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Smarcc1P97496 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.89■□□□□ 0.29
Smarcc1P97496 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.89■□□□□ 0.29
Smarcc1P97496 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc1P97496 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc1P97496 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc1P97496 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc1P97496 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc1P97496 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Gm16479-201ENSMUST00000121706 932 ntBASIC16.88■□□□□ 0.29
Smarcc1P97496 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.88■□□□□ 0.29
Smarcc1P97496 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc1P97496 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarcc1P97496 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc1P97496 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.87■□□□□ 0.29
Smarcc1P97496 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc1P97496 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.87■□□□□ 0.29
Smarcc1P97496 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms