Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Gm43697-201ENSMUST00000199637 2581 ntBASIC8.97□□□□□ -0.97
PrkdcP97313 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC8.97□□□□□ -0.97
PrkdcP97313 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC8.97□□□□□ -0.97
PrkdcP97313 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC8.97□□□□□ -0.97
PrkdcP97313 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
PrkdcP97313 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Gm37728-201ENSMUST00000195025 2292 ntBASIC8.97□□□□□ -0.97
PrkdcP97313 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
PrkdcP97313 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Gm18201-201ENSMUST00000174735 875 ntBASIC8.97□□□□□ -0.97
PrkdcP97313 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
PrkdcP97313 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
PrkdcP97313 Gm15573-201ENSMUST00000119487 540 ntBASIC8.97□□□□□ -0.97
PrkdcP97313 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
PrkdcP97313 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
PrkdcP97313 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PrkdcP97313 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC8.96□□□□□ -0.97
PrkdcP97313 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC8.96□□□□□ -0.97
PrkdcP97313 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC8.96□□□□□ -0.97
PrkdcP97313 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.96□□□□□ -0.97
PrkdcP97313 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
PrkdcP97313 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
PrkdcP97313 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
PrkdcP97313 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
PrkdcP97313 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PrkdcP97313 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC8.96□□□□□ -0.98
PrkdcP97313 Gm10731-201ENSMUST00000181171 448 ntBASIC8.96□□□□□ -0.98
PrkdcP97313 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
PrkdcP97313 Gm9111-201ENSMUST00000219394 709 ntBASIC8.96□□□□□ -0.98
PrkdcP97313 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
PrkdcP97313 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
PrkdcP97313 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Mir181d-201ENSMUST00000102383 72 ntBASIC8.96□□□□□ -0.98
PrkdcP97313 Gm16166-201ENSMUST00000118291 787 ntBASIC8.96□□□□□ -0.98
PrkdcP97313 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC8.96□□□□□ -0.98
PrkdcP97313 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC8.96□□□□□ -0.98
PrkdcP97313 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
PrkdcP97313 Gm45120-201ENSMUST00000208880 408 ntBASIC8.96□□□□□ -0.98
PrkdcP97313 Gm17827-201ENSMUST00000211825 742 ntBASIC8.96□□□□□ -0.98
PrkdcP97313 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC8.96□□□□□ -0.98
PrkdcP97313 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
PrkdcP97313 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PrkdcP97313 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm15036-201ENSMUST00000118880 400 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Gm11451-201ENSMUST00000118946 630 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm13937-201ENSMUST00000121000 988 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm25072-201ENSMUST00000175233 235 ntBASIC8.95□□□□□ -0.98
PrkdcP97313 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC8.95□□□□□ -0.98
PrkdcP97313 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PrkdcP97313 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms