Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim43bP86448 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim43bP86448 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim43bP86448 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Trim43bP86448 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.97□□□□□ -0.17
Trim43bP86448 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim43bP86448 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.97□□□□□ -0.17
Trim43bP86448 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim43bP86448 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim43bP86448 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim43bP86448 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Trim43bP86448 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43bP86448 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim43bP86448 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim43bP86448 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim43bP86448 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim43bP86448 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim43bP86448 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim43bP86448 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim43bP86448 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim43bP86448 Gm9063-201ENSMUST00000223299 582 ntBASIC13.96□□□□□ -0.17
Trim43bP86448 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.96□□□□□ -0.17
Trim43bP86448 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43bP86448 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim43bP86448 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim43bP86448 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.96□□□□□ -0.17
Trim43bP86448 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim43bP86448 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.96□□□□□ -0.18
Trim43bP86448 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trim43bP86448 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.96□□□□□ -0.18
Trim43bP86448 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim43bP86448 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim43bP86448 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms