Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Thap2-203ENSMUST00000218989 527 ntBASIC11.37□□□□□ -0.59
SgcaP82350 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.37□□□□□ -0.59
SgcaP82350 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Gm10819-201ENSMUST00000099988 561 ntBASIC11.37□□□□□ -0.59
SgcaP82350 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
SgcaP82350 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.37□□□□□ -0.59
SgcaP82350 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.37□□□□□ -0.59
SgcaP82350 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.36□□□□□ -0.59
SgcaP82350 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Gm11452-201ENSMUST00000122376 690 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Mir8098-201ENSMUST00000184011 137 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Gm10060-201ENSMUST00000212002 111 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcaP82350 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SgcaP82350 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SgcaP82350 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.36□□□□□ -0.59
SgcaP82350 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcaP82350 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcaP82350 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcaP82350 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
SgcaP82350 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcaP82350 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcaP82350 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcaP82350 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SgcaP82350 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.35□□□□□ -0.59
SgcaP82350 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcaP82350 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcaP82350 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcaP82350 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.35□□□□□ -0.59
SgcaP82350 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.35□□□□□ -0.59
SgcaP82350 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms