Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.76□□□□□ -0.53
Atf1P81269 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf1P81269 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf1P81269 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atf1P81269 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.76□□□□□ -0.53
Atf1P81269 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.75□□□□□ -0.53
Atf1P81269 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.75□□□□□ -0.53
Atf1P81269 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.75□□□□□ -0.53
Atf1P81269 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.75□□□□□ -0.53
Atf1P81269 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Atf1P81269 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.75□□□□□ -0.53
Atf1P81269 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.75□□□□□ -0.53
Atf1P81269 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Atf1P81269 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Atf1P81269 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Atf1P81269 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.74□□□□□ -0.53
Atf1P81269 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.74□□□□□ -0.53
Atf1P81269 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.74□□□□□ -0.53
Atf1P81269 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.74□□□□□ -0.53
Atf1P81269 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.74□□□□□ -0.53
Atf1P81269 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.74□□□□□ -0.53
Atf1P81269 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Atf1P81269 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Atf1P81269 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Atf1P81269 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Atf1P81269 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Atf1P81269 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.73□□□□□ -0.53
Atf1P81269 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Atf1P81269 Gm15770-201ENSMUST00000117498 584 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms