Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.65□□□□□ -0.86
Rpl39P62892 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.65□□□□□ -0.86
Rpl39P62892 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC9.65□□□□□ -0.86
Rpl39P62892 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.65□□□□□ -0.86
Rpl39P62892 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Rpl39P62892 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39P62892 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39P62892 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39P62892 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.65□□□□□ -0.86
Rpl39P62892 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39P62892 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39P62892 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39P62892 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39P62892 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39P62892 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Rpl39P62892 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39P62892 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Rpl39P62892 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Rpl39P62892 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39P62892 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.64□□□□□ -0.87
Rpl39P62892 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm29310-201ENSMUST00000185468 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21825-201ENSMUST00000185728 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm29109-201ENSMUST00000185895 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21896-201ENSMUST00000186520 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21873-201ENSMUST00000186728 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21794-201ENSMUST00000187056 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21880-201ENSMUST00000187275 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21826-201ENSMUST00000187451 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21198-201ENSMUST00000188393 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21749-201ENSMUST00000189343 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21901-201ENSMUST00000189568 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm29424-201ENSMUST00000189716 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm28599-201ENSMUST00000189838 694 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21867-201ENSMUST00000189917 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm29269-201ENSMUST00000190087 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21722-201ENSMUST00000190153 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm28423-201ENSMUST00000190701 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21899-201ENSMUST00000190745 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21910-201ENSMUST00000191163 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21849-201ENSMUST00000191571 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm28678-201ENSMUST00000191593 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm20910-201ENSMUST00000193268 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Gm21871-201ENSMUST00000194621 696 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm18027-201ENSMUST00000218947 619 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
Rpl39P62892 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Rpl39P62892 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.64□□□□□ -0.87
Rpl39P62892 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39P62892 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Rpl39P62892 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39P62892 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rpl39P62892 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Rpl39P62892 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms