Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lsm3P62311 Gm7222-201ENSMUST00000117512 906 ntBASIC12.33□□□□□ -0.44
Lsm3P62311 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.33□□□□□ -0.44
Lsm3P62311 Mir6982-201ENSMUST00000184354 68 ntBASIC12.33□□□□□ -0.44
Lsm3P62311 Gm27704-201ENSMUST00000185094 107 ntBASIC12.33□□□□□ -0.44
Lsm3P62311 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.33□□□□□ -0.44
Lsm3P62311 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.33□□□□□ -0.44
Lsm3P62311 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lsm3P62311 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.33□□□□□ -0.44
Lsm3P62311 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.33□□□□□ -0.44
Lsm3P62311 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.32□□□□□ -0.44
Lsm3P62311 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.32□□□□□ -0.44
Lsm3P62311 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.32□□□□□ -0.44
Lsm3P62311 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.32□□□□□ -0.44
Lsm3P62311 Gm10154-201ENSMUST00000084445 354 ntBASIC12.32□□□□□ -0.44
Lsm3P62311 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Lsm3P62311 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lsm3P62311 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.32□□□□□ -0.44
Lsm3P62311 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm3P62311 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lsm3P62311 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm3P62311 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lsm3P62311 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Lsm3P62311 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lsm3P62311 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Gm12882-201ENSMUST00000121696 517 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44357-201ENSMUST00000195897 142 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm19658-201ENSMUST00000196231 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44367-201ENSMUST00000196836 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44350-201ENSMUST00000197197 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44390-201ENSMUST00000197533 144 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44313-201ENSMUST00000198018 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44486-201ENSMUST00000198508 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44314-201ENSMUST00000199263 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44394-201ENSMUST00000199558 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44484-201ENSMUST00000199873 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44466-201ENSMUST00000200264 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Gm44359-201ENSMUST00000200671 138 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm3P62311 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.31□□□□□ -0.44
Lsm3P62311 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms