Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Cks1bP61025 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.69□□□□□ -0.86
Cks1bP61025 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Cks1bP61025 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.69□□□□□ -0.86
Cks1bP61025 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.69□□□□□ -0.86
Cks1bP61025 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.69□□□□□ -0.86
Cks1bP61025 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cks1bP61025 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.69□□□□□ -0.86
Cks1bP61025 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cks1bP61025 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1bP61025 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cks1bP61025 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1bP61025 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1bP61025 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.68□□□□□ -0.86
Cks1bP61025 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.68□□□□□ -0.86
Cks1bP61025 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1bP61025 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cks1bP61025 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Cks1bP61025 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Cks1bP61025 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Gm5682-201ENSMUST00000173402 505 ntBASIC9.68□□□□□ -0.86
Cks1bP61025 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Gm6550-201ENSMUST00000187574 993 ntBASIC9.68□□□□□ -0.86
Cks1bP61025 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC9.68□□□□□ -0.86
Cks1bP61025 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC9.68□□□□□ -0.86
Cks1bP61025 Gm45167-201ENSMUST00000208007 322 ntBASIC9.68□□□□□ -0.86
Cks1bP61025 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cks1bP61025 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms