Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.91□□□□□ -0.5
GdnfP48540 Gm5779-201ENSMUST00000218467 910 ntBASIC11.91□□□□□ -0.5
GdnfP48540 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Gm10275-201ENSMUST00000092620 635 ntBASIC11.91□□□□□ -0.5
GdnfP48540 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
GdnfP48540 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.91□□□□□ -0.5
GdnfP48540 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
GdnfP48540 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.91□□□□□ -0.5
GdnfP48540 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
GdnfP48540 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.91□□□□□ -0.5
GdnfP48540 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.91□□□□□ -0.5
GdnfP48540 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
GdnfP48540 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
GdnfP48540 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.9□□□□□ -0.5
GdnfP48540 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
GdnfP48540 Gm29310-201ENSMUST00000185468 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21825-201ENSMUST00000185728 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm29109-201ENSMUST00000185895 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21896-201ENSMUST00000186520 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21873-201ENSMUST00000186728 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21794-201ENSMUST00000187056 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21880-201ENSMUST00000187275 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21826-201ENSMUST00000187451 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21198-201ENSMUST00000188393 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21749-201ENSMUST00000189343 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21901-201ENSMUST00000189568 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm29424-201ENSMUST00000189716 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm28599-201ENSMUST00000189838 694 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21867-201ENSMUST00000189917 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm29269-201ENSMUST00000190087 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21722-201ENSMUST00000190153 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm28423-201ENSMUST00000190701 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21899-201ENSMUST00000190745 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21910-201ENSMUST00000191163 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21849-201ENSMUST00000191571 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm28678-201ENSMUST00000191593 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm20910-201ENSMUST00000193268 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm21871-201ENSMUST00000194621 696 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm5312-201ENSMUST00000203728 547 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Gm18049-201ENSMUST00000208909 581 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Gm8396-201ENSMUST00000057361 823 ntBASIC11.9□□□□□ -0.5
GdnfP48540 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
GdnfP48540 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
GdnfP48540 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.9□□□□□ -0.5
GdnfP48540 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
GdnfP48540 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
GdnfP48540 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
GdnfP48540 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
GdnfP48540 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
GdnfP48540 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
GdnfP48540 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
GdnfP48540 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
GdnfP48540 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
GdnfP48540 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.89□□□□□ -0.51
GdnfP48540 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms