Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox18P43680 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox18P43680 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox18P43680 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox18P43680 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.05□□□□□ -0.32
Sox18P43680 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox18P43680 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sox18P43680 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox18P43680 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox18P43680 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox18P43680 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox18P43680 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox18P43680 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox18P43680 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Gm25668-201ENSMUST00000157700 129 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Gm17376-201ENSMUST00000166016 84 ntBASIC13.04□□□□□ -0.32
Sox18P43680 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Gm22119-201ENSMUST00000175594 99 ntBASIC13.04□□□□□ -0.32
Sox18P43680 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Gm37986-201ENSMUST00000193285 383 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Gm6082-201ENSMUST00000215204 454 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Gm10268-201ENSMUST00000085340 555 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.04□□□□□ -0.32
Sox18P43680 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Gm44863-201ENSMUST00000207613 1422 ntBASIC13.04□□□□□ -0.32
Sox18P43680 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Sox18P43680 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.04□□□□□ -0.32
Sox18P43680 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox18P43680 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sox18P43680 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox18P43680 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox18P43680 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm13786-201ENSMUST00000122371 333 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm2991-201ENSMUST00000173338 480 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm26927-201ENSMUST00000182385 965 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox18P43680 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm45071-201ENSMUST00000205353 571 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.03□□□□□ -0.32
Sox18P43680 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Sox18P43680 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox18P43680 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.03□□□□□ -0.32
Sox18P43680 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox18P43680 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox18P43680 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox18P43680 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms