Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm24513-201ENSMUST00000174964 138 ntBASIC13.11□□□□□ -0.31
Tnfsf4P43488 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm27622-201ENSMUST00000183779 60 ntBASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm27397-201ENSMUST00000184997 107 ntBASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.11□□□□□ -0.31
Tnfsf4P43488 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfsf4P43488 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.11□□□□□ -0.31
Tnfsf4P43488 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Mir449b-201ENSMUST00000104833 80 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Gm4804-201ENSMUST00000182234 999 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 Gm27533-201ENSMUST00000183800 152 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Gm46209-201ENSMUST00000217912 553 ntBASIC13.1□□□□□ -0.31
Tnfsf4P43488 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfsf4P43488 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gm15393-201ENSMUST00000120499 219 ntBASIC13.09□□□□□ -0.31
Tnfsf4P43488 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gm5312-201ENSMUST00000203728 547 ntBASIC13.09□□□□□ -0.31
Tnfsf4P43488 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Chchd1-203ENSMUST00000224633 557 ntBASIC13.09□□□□□ -0.31
Tnfsf4P43488 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfsf4P43488 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms