Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.44□□□□□ -0.42
Nkx2-2P42586 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Nkx2-2P42586 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-2P42586 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Gm15678-201ENSMUST00000117573 960 ntBASIC12.43□□□□□ -0.42
Nkx2-2P42586 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.43□□□□□ -0.42
Nkx2-2P42586 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.43□□□□□ -0.42
Nkx2-2P42586 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.43□□□□□ -0.42
Nkx2-2P42586 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx2-2P42586 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.42□□□□□ -0.42
Nkx2-2P42586 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gm12341-201ENSMUST00000119724 503 ntBASIC12.42□□□□□ -0.42
Nkx2-2P42586 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.42□□□□□ -0.42
Nkx2-2P42586 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nkx2-2P42586 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx2-2P42586 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms